CDS

Accession Number TCMCG016C04886
gbkey CDS
Protein Id OMO95675.1
Location join(16661..16782,16900..17251,17523..17670,18666..18803,18905..18967,19901..20022,20642..20879,21430..21641,21903..22003,22193..22274,22558..22619,23201..23315)
Organism Corchorus capsularis
locus_tag CCACVL1_05315

Protein

Length 584aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007606.1
Definition Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p [Corchorus capsularis]
Locus_tag CCACVL1_05315

EGGNOG-MAPPER Annotation

COG_category A
Description Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K21971        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016427        [VIEW IN EMBL-EBI]
GO:0016428        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCATCATCAGAACGTTACAGTTACAATCCCATATTGCGTTGGAACCCTGAGGTTGAAGATTACTTCATCAAAGCATATGGGTCTCTTCATTTTGCTCAAATTTCCCAAGCCTTAACGCGTCCATCTTGCTATTCTTGTATTCGAGTTAACACTCTGAAGTCCACAAGTGATGCTGTCATTGAGAAACTTCAGAAAATCATGAGCAATTCAGGGTCTGAAAATGATGTTGAAGATGTAAATTTCAAAGGAACTACGACAAGTCATAGTATTGATTCGGATATGGCTGAGAAGGAATCGAGCTCTCGAAACGGGTCCATCTCTAAGTGTCAGATACCAGGGTTGGAATATGTTGTATTTGTTAAAGGTTCTGGACCACATGCCATTGACTATGGTTATGTGCCTGACAAACCTCCAAAGGAGGTACTTGTTAGCAGAAAATGTGCTGAAGCTGTTCTTCGAGGTGCTCAGGTATATGTTCCTGGTGTGATGGCCTGCAGTTCTCATGTTGAGGAAGGAGATATAGTTGCAGTTTCTGTCGCTGTGGAGCAGCCTGCTCCTGATGGTGGATGGGGACTTGGTATAACACGTGGGACTGTTCTGCAGGGAGTAGAGACAGATCCTTTTTACTTTGAACGAAATGGATTATACATTGGTCAAGGGAAAACAGTGTTGTCAAGAGCTGGGATCTTTCGTGCTTCTCAAGGAATTGCGGTTGATATGAACAATCGAGTATTTAAGTTGCCTTCTTTTTATGATGTGCTTGAGGGGGAAATATTTCTTCAGAACCTGCCAAGCATTGTCACTGCTCATGCTCTTGATCCTCAAAAAGGTGAACGGATACTAGACATGTGTGCAGCTCCAGGAGGGAAGACAACTGCAATTGCTATCCTTATGAAGGATGAAGGGGAGGTCATTGCAGCAGACAGATCTCATAATAAGGTGATGGATATTCAGAAATTGGCTGCTGAGTTGGGTTTGACTTGTATCACAACATACAAGCTAGATGCTCTCAAATCTGTTTGTAGAAGAAATGAGTCAAAAGATATGACCACTTGCTGCTCTAACAAGGATGACAATAACATTGTAATTCAAAGTTCTGACTTGAGGCCTCCTGTGAATGGAAGCTCATCTAATACCACTCCAGGATTGAATGCTGATAAAAATTGCAAGGAGAATGTTAGCAATGATAAAGCGAATGAGAGAACTTACGTTAGCAAAGCTGACATCAGGAAGAACATGCGAAGAATGAGGAATGGCCCTGGGAGAAATCAAAACCTAGGTGGTAGGGCTGAAAATTCGAAAGGCTTCCTTCCTAACAGCTTTGATCGGGTTCTTCTTGACGCTCCTTGTTCTGCTCTTGGTTTGAGGCCTCGATTGTTTGCTGGAGAGGAAACAATAGAGACATTAAGGAACCATGGTAAATATCAAAGGAGAATGTTTGATCAGGCTGTTCAGTTAGTTCGCCCTGGTGGAGTCCTTGTATACTCAACATGCACAATTAATCCTGGTGAGAATGAAGCATTGGTTCGATATGCTTTGGATAAGTATAAGTTCCTCTCTTTAGCACCGCAGCATCCAAGAATTGGAGGACCTGGTCTTGTTGGTAGTTGTCAATTTCCAGATGGATATGTTGAAGAGTGGTTAAGACCTGGAGAGGAGGAATTGGTGCAGAGGTTTGATCCTTGGTCTCCCCTCGATACAATTGGGTTTTTCATAGCCAAGTTTGTTGTAGGCTCCAAAGATACCTGA
Protein:  
MDASSERYSYNPILRWNPEVEDYFIKAYGSLHFAQISQALTRPSCYSCIRVNTLKSTSDAVIEKLQKIMSNSGSENDVEDVNFKGTTTSHSIDSDMAEKESSSRNGSISKCQIPGLEYVVFVKGSGPHAIDYGYVPDKPPKEVLVSRKCAEAVLRGAQVYVPGVMACSSHVEEGDIVAVSVAVEQPAPDGGWGLGITRGTVLQGVETDPFYFERNGLYIGQGKTVLSRAGIFRASQGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKVMDIQKLAAELGLTCITTYKLDALKSVCRRNESKDMTTCCSNKDDNNIVIQSSDLRPPVNGSSSNTTPGLNADKNCKENVSNDKANERTYVSKADIRKNMRRMRNGPGRNQNLGGRAENSKGFLPNSFDRVLLDAPCSALGLRPRLFAGEETIETLRNHGKYQRRMFDQAVQLVRPGGVLVYSTCTINPGENEALVRYALDKYKFLSLAPQHPRIGGPGLVGSCQFPDGYVEEWLRPGEEELVQRFDPWSPLDTIGFFIAKFVVGSKDT